Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX359238: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-271601' containing sample 'Staphylococcus aureus M0131'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.5M spots, 901.9M bases, 403.1Mb downloads

UUID: e0625022-7851-4291-a783-d01c6eaf10d2

Design: Illumina sequencing of Staphylococcus aureus M0131 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216249 • SRP030316 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0131

SAMN02325204 • SRS486899 • All experiments • All runs

Organism: Staphylococcus aureus M0131

Library:

Name: Pond-271601

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385002.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHJA

material_type: DNA:DNA Somatic

product_order: PDO-1797

product_part_number: P-WG-0004

project: G44539

research_project: RP-433

root_sample_id: SM-4C5BX

sample_id: SM-4RHJA

work_request: 37546

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-16 20:54:12.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.5M spots, 901.9M bases, 403.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001674	2,239,900	452.5M	202.1Mb	2013-09-24
SRR1001675	2,225,058	449.5M	201Mb	2013-09-24

ID:: 507539

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